Index _ | A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | Y _ __init__() (pypomp.core.results.PanelPompMIFResult method) (pypomp.core.results.PanelPompPFilterResult method) (pypomp.core.results.PanelPompTrainResult method) (pypomp.core.results.PompMIFResult method) (pypomp.core.results.PompPFilterResult method) (pypomp.core.results.PompTrainResult method) (pypomp.core.results.ResultsHistory method) (pypomp.functional.PompStruct method) A a (pypomp.core.rw_sigma.RWSigma attribute) accumvars (pypomp.core.pomp.Pomp attribute) (pypomp.functional.PompStruct attribute) Adam (class in pypomp.core.optimizer) add() (pypomp.core.results.ResultsHistory method) all_names (pypomp.core.rw_sigma.RWSigma attribute) alpha (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompTrainResult attribute) alpha_cooling (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompTrainResult attribute) append() (pypomp.core.results.ResultsHistory method) arma() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) B BFGS (class in pypomp.core.optimizer) block (pypomp.core.results.PanelPompMIFResult attribute) C c (pypomp.core.rw_sigma.RWSigma attribute) canonical_param_names (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) canonical_shared_param_names (pypomp.panel.panel.PanelPomp attribute) canonical_unit_param_names (pypomp.panel.panel.PanelPomp attribute) ci (pypomp.mcap.MCAPResult attribute) clear() (pypomp.core.results.ResultsHistory method) CLL() (pypomp.core.pomp.Pomp method) (pypomp.core.results.PanelPompMIFResult method) (pypomp.core.results.PanelPompPFilterResult method) (pypomp.core.results.PanelPompTrainResult method) (pypomp.core.results.PompMIFResult method) (pypomp.core.results.PompPFilterResult method) (pypomp.core.results.PompTrainResult method) (pypomp.core.results.ResultsHistory method) (pypomp.panel.panel.PanelPomp method) CLL_da (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PompPFilterResult attribute) cool() (pypomp.core.rw_sigma.RWSigma method) cooling_fn (pypomp.core.rw_sigma.RWSigma attribute) copy() (pypomp.core.rw_sigma.RWSigma method) cosine_cooling() (pypomp.core.rw_sigma.RWSigma method) cosine_decay() (pypomp.core.learning_rate.LearningRate method) count() (pypomp.functional.PompStruct method) covars (pypomp.core.pomp.Pomp attribute) covars_extended (pypomp.functional.PompStruct attribute) custom_cooling() (pypomp.core.rw_sigma.RWSigma method) D delta (pypomp.mcap.MCAPResult attribute) dhaka() (in module pypomp.models) dmeas (pypomp.core.pomp.Pomp attribute) dmeas_per (pypomp.functional.PompStruct attribute) dmeas_pf (pypomp.functional.PompStruct attribute) dpop() (in module pypomp.functional) dpop_train() (pypomp.core.pomp.Pomp method) dt_array_extended (pypomp.functional.PompStruct attribute) E ESS() (pypomp.core.pomp.Pomp method) (pypomp.core.results.PanelPompMIFResult method) (pypomp.core.results.PanelPompPFilterResult method) (pypomp.core.results.PanelPompTrainResult method) (pypomp.core.results.PompMIFResult method) (pypomp.core.results.PompPFilterResult method) (pypomp.core.results.PompTrainResult method) (pypomp.core.results.ResultsHistory method) (pypomp.panel.panel.PanelPomp method) ESS_da (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PompPFilterResult attribute) eta (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompTrainResult attribute) execution_time (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompMIFResult attribute) (pypomp.core.results.PompPFilterResult attribute) (pypomp.core.results.PompTrainResult attribute) expit() (in module pypomp.maths) F fast_binomial() (in module pypomp.random) fast_gamma() (in module pypomp.random) fast_multinomial() (in module pypomp.random) fast_nbinomial() (in module pypomp.random) fast_poisson() (in module pypomp.random) filter_mean (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PompPFilterResult attribute) fit (pypomp.mcap.MCAPResult attribute) fresh_key (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) from_est (pypomp.core.par_trans.ParTrans attribute) FullMatrixAdam (class in pypomp.core.optimizer) G geometric_cooling() (pypomp.core.rw_sigma.RWSigma method) geometric_decay() (pypomp.core.learning_rate.LearningRate method) get() (pypomp.core.rw_sigma.RWSigma method) get_param_names() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) get_shared_param_names() (pypomp.core.parameters.PanelParameters method) get_unit_names() (pypomp.core.parameters.PanelParameters method) (pypomp.panel.panel.PanelPomp method) get_unit_param_names() (pypomp.core.parameters.PanelParameters method) get_unit_parameters() (pypomp.panel.panel.PanelPomp method) H hyperbolic_cooling() (pypomp.core.rw_sigma.RWSigma method) I index() (pypomp.functional.PompStruct method) init_names (pypomp.core.rw_sigma.RWSigma attribute) init_state() (pypomp.core.optimizer.Adam method) (pypomp.core.optimizer.BFGS method) (pypomp.core.optimizer.FullMatrixAdam method) (pypomp.core.optimizer.Newton method) (pypomp.core.optimizer.Optimizer method) (pypomp.core.optimizer.SGD method) (pypomp.core.optimizer.WeightedNewton method) items() (pypomp.core.rw_sigma.RWSigma method) J J (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompMIFResult attribute) (pypomp.core.results.PompPFilterResult attribute) (pypomp.core.results.PompTrainResult attribute) K key (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompMIFResult attribute) (pypomp.core.results.PompPFilterResult attribute) (pypomp.core.results.PompTrainResult attribute) keys() (pypomp.core.rw_sigma.RWSigma method) L last() (pypomp.core.results.ResultsHistory method) LearningRate (class in pypomp.core.learning_rate) level (pypomp.mcap.MCAPResult attribute) LG() (in module pypomp.models) linear_decay() (pypomp.core.learning_rate.LearningRate method) logit (in module pypomp.maths) logLik (pypomp.core.parameters.PanelParameters property) (pypomp.core.parameters.PompParameters property) logLik_unit (pypomp.core.parameters.PanelParameters property) logLiks (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompPFilterResult attribute) logmeanexp() (in module pypomp.maths) logmeanexp_se() (in module pypomp.maths) M M (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompMIFResult attribute) (pypomp.core.results.PompTrainResult attribute) (pypomp.core.rw_sigma.RWSigma attribute) mcap() (in module pypomp.mcap) MCAPResult (class in pypomp.mcap) merge() (pypomp.core.parameters.PompParameters static method) (pypomp.core.pomp.Pomp static method) (pypomp.core.results.PanelPompMIFResult class method) (pypomp.core.results.PanelPompPFilterResult class method) (pypomp.core.results.PanelPompTrainResult class method) (pypomp.core.results.PompMIFResult class method) (pypomp.core.results.PompPFilterResult class method) (pypomp.core.results.PompTrainResult class method) (pypomp.core.results.ResultsHistory static method) (pypomp.panel.panel.PanelPomp static method) metadata (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) method (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompMIFResult attribute) (pypomp.core.results.PompPFilterResult attribute) (pypomp.core.results.PompTrainResult attribute) mif() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) mix_and_match() (pypomp.core.parameters.PanelParameters method) (pypomp.panel.panel.PanelPomp method) mle (pypomp.mcap.MCAPResult attribute) mop() (in module pypomp.functional) N n_monitors (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PompMIFResult attribute) negbin() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) Newton (class in pypomp.core.optimizer) not_init_names (pypomp.core.rw_sigma.RWSigma attribute) nstep_array (pypomp.functional.PompStruct attribute) num_params() (pypomp.core.parameters.PompParameters method) num_replicates() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) O Optimizer (class in pypomp.core.optimizer) optimizer (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompTrainResult attribute) P PanelParameters (class in pypomp.core.parameters) PanelPomp (class in pypomp.panel.panel) PanelPompMIFResult (class in pypomp.core.results) PanelPompPFilterResult (class in pypomp.core.results) PanelPompTrainResult (class in pypomp.core.results) par_trans (pypomp.core.pomp.Pomp attribute) (pypomp.functional.PompStruct attribute) param_names (pypomp.functional.PompStruct attribute) params() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) ParTrans (class in pypomp.core.par_trans) pfilter() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) plot_simulations() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) plot_traces() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) Pomp (class in pypomp.core.pomp) Pomp() (pypomp.models.UKMeasles class method) PompMIFResult (class in pypomp.core.results) PompParameters (class in pypomp.core.parameters) PompPFilterResult (class in pypomp.core.results) PompStruct (class in pypomp.functional) PompTrainResult (class in pypomp.core.results) prediction_mean (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PompPFilterResult attribute) print_metadata() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) print_summary() (pypomp.core.pomp.Pomp method) (pypomp.core.results.PanelPompMIFResult method) (pypomp.core.results.PanelPompPFilterResult method) (pypomp.core.results.PanelPompTrainResult method) (pypomp.core.results.PompMIFResult method) (pypomp.core.results.PompPFilterResult method) (pypomp.core.results.PompTrainResult method) (pypomp.core.results.ResultsHistory method) (pypomp.panel.panel.PanelPomp method) probe() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) prune() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) Q quadratic_coef (pypomp.mcap.MCAPResult attribute) quadratic_max (pypomp.mcap.MCAPResult attribute) R rates (pypomp.core.learning_rate.LearningRate attribute) reps (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PompPFilterResult attribute) results() (pypomp.core.pomp.Pomp method) (pypomp.core.results.ResultsHistory method) (pypomp.panel.panel.PanelPomp method) results_history (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) ResultsHistory (class in pypomp.core.results) rinit (pypomp.core.pomp.Pomp attribute) rinit_per (pypomp.functional.PompStruct attribute) rinit_pf (pypomp.functional.PompStruct attribute) rmeas (pypomp.core.pomp.Pomp attribute) rmeas_pf (pypomp.functional.PompStruct attribute) rproc (pypomp.core.pomp.Pomp attribute) rproc_per (pypomp.functional.PompStruct attribute) rproc_pf (pypomp.functional.PompStruct attribute) rw_sd (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PompMIFResult attribute) RWSigma (class in pypomp.core.rw_sigma) S s (pypomp.core.rw_sigma.RWSigma attribute) sample_params() (pypomp.core.pomp.Pomp static method) (pypomp.panel.panel.PanelPomp static method) se_mc (pypomp.mcap.MCAPResult attribute) se_stat (pypomp.mcap.MCAPResult attribute) se_total (pypomp.mcap.MCAPResult attribute) set_params() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) SGD (class in pypomp.core.optimizer) shared_traces (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) sigmas (pypomp.core.rw_sigma.RWSigma attribute) simulate() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) spx() (in module pypomp.models) statenames (pypomp.core.pomp.Pomp attribute) step() (pypomp.core.optimizer.Adam method) (pypomp.core.optimizer.BFGS method) (pypomp.core.optimizer.FullMatrixAdam method) (pypomp.core.optimizer.Newton method) (pypomp.core.optimizer.Optimizer method) (pypomp.core.optimizer.SGD method) (pypomp.core.optimizer.WeightedNewton method) subset() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) T t0 (pypomp.core.pomp.Pomp attribute) (pypomp.functional.PompStruct attribute) theta (pypomp.core.pomp.Pomp attribute) (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompMIFResult attribute) (pypomp.core.results.PompPFilterResult attribute) (pypomp.core.results.PompTrainResult attribute) (pypomp.panel.panel.PanelPomp attribute) thresh (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PompMIFResult attribute) (pypomp.core.results.PompPFilterResult attribute) (pypomp.core.results.PompTrainResult attribute) time() (pypomp.core.pomp.Pomp method) (pypomp.core.results.ResultsHistory method) (pypomp.panel.panel.PanelPomp method) times (pypomp.functional.PompStruct attribute) timestamp (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompPFilterResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) (pypomp.core.results.PompMIFResult attribute) (pypomp.core.results.PompPFilterResult attribute) (pypomp.core.results.PompTrainResult attribute) to_array() (pypomp.core.learning_rate.LearningRate method) to_dataframe() (pypomp.core.results.PanelPompMIFResult method) (pypomp.core.results.PanelPompPFilterResult method) (pypomp.core.results.PanelPompTrainResult method) (pypomp.core.results.PompMIFResult method) (pypomp.core.results.PompPFilterResult method) (pypomp.core.results.PompTrainResult method) to_est (pypomp.core.par_trans.ParTrans attribute) to_jax_array() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) traces() (pypomp.core.pomp.Pomp method) (pypomp.core.results.PanelPompMIFResult method) (pypomp.core.results.PanelPompPFilterResult method) (pypomp.core.results.PanelPompTrainResult method) (pypomp.core.results.PompMIFResult method) (pypomp.core.results.PompPFilterResult method) (pypomp.core.results.PompTrainResult method) (pypomp.core.results.ResultsHistory method) (pypomp.panel.panel.PanelPomp method) traces_da (pypomp.core.results.PompMIFResult attribute) (pypomp.core.results.PompTrainResult attribute) train() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) transform() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) U unit_objects (pypomp.panel.panel.PanelPomp attribute) unit_traces (pypomp.core.results.PanelPompMIFResult attribute) (pypomp.core.results.PanelPompTrainResult attribute) V values() (pypomp.core.rw_sigma.RWSigma method) vcov (pypomp.mcap.MCAPResult attribute) W WeightedNewton (class in pypomp.core.optimizer) Y ys (pypomp.core.pomp.Pomp attribute) (pypomp.functional.PompStruct attribute) (pypomp.panel.panel.PanelPomp attribute)