Index A | C | D | E | F | G | I | L | M | N | P | Q | R | S | T | U | V | Y A accumvars (pypomp.core.pomp.Pomp attribute) AK_mles() (pypomp.models.measles.measlesPomp.UKMeasles static method) all_names (pypomp.core.rw_sigma.RWSigma attribute) arma() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) C canonical_param_names (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) canonical_shared_param_names (pypomp.panel.panel.PanelPomp attribute) canonical_unit_param_names (pypomp.panel.panel.PanelPomp attribute) ci (pypomp.mcap.MCAPResult attribute) CLL() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) cool() (pypomp.core.rw_sigma.RWSigma method) covars (pypomp.core.pomp.Pomp attribute) D dacca() (in module pypomp.models.dacca) delta (pypomp.mcap.MCAPResult attribute) dmeas (pypomp.core.pomp.Pomp attribute) dpop() (in module pypomp.functional) dpop_train() (pypomp.core.pomp.Pomp method) E ESS() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) expit() (in module pypomp.maths) F fast_binomial() (in module pypomp.random) fast_gamma() (in module pypomp.random) fast_multinomial() (in module pypomp.random) fast_nbinomial() (in module pypomp.random) fast_poisson() (in module pypomp.random) fit (pypomp.mcap.MCAPResult attribute) fresh_key (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) from_est (pypomp.core.par_trans.ParTrans attribute) G get_param_names() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) get_shared_param_names() (pypomp.core.parameters.PanelParameters method) get_unit_names() (pypomp.core.parameters.PanelParameters method) (pypomp.panel.panel.PanelPomp method) get_unit_param_names() (pypomp.core.parameters.PanelParameters method) get_unit_parameters() (pypomp.panel.panel.PanelPomp method) I init_names (pypomp.core.rw_sigma.RWSigma attribute) L level (pypomp.mcap.MCAPResult attribute) LG() (in module pypomp.models.linear_gaussian) logit (in module pypomp.maths) logLik (pypomp.core.parameters.PanelParameters property) (pypomp.core.parameters.PompParameters property) logLik_unit (pypomp.core.parameters.PanelParameters property) logmeanexp() (in module pypomp.maths) logmeanexp_se() (in module pypomp.maths) M mcap() (in module pypomp.mcap) MCAPResult (class in pypomp.mcap) merge() (pypomp.core.parameters.PompParameters static method) (pypomp.core.pomp.Pomp static method) (pypomp.panel.panel.PanelPomp static method) metadata (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) mif() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) mix_and_match() (pypomp.core.parameters.PanelParameters method) (pypomp.panel.panel.PanelPomp method) mle (pypomp.mcap.MCAPResult attribute) module pypomp.models.dacca pypomp.models.linear_gaussian pypomp.models.measles.measlesPomp pypomp.models.spx mop() (in module pypomp.functional) N negbin() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) not_init_names (pypomp.core.rw_sigma.RWSigma attribute) num_params() (pypomp.core.parameters.PompParameters method) num_replicates() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) P panel_transform() (pypomp.core.par_trans.ParTrans method) panel_transform_list() (pypomp.core.par_trans.ParTrans method) PanelParameters (class in pypomp.core.parameters) PanelPomp (class in pypomp.panel.panel) PanelPompMIFResult (class in pypomp.core.results) PanelPompPFilterResult (class in pypomp.core.results) PanelPompTrainResult (class in pypomp.core.results) par_trans (pypomp.core.pomp.Pomp attribute) ParTrans (class in pypomp.core.par_trans) pfilter() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) plot_simulations() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) plot_traces() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) Pomp (class in pypomp.core.pomp) Pomp() (pypomp.models.measles.measlesPomp.UKMeasles static method) PompMIFResult (class in pypomp.core.results) PompParameters (class in pypomp.core.parameters) PompPFilterResult (class in pypomp.core.results) PompStruct (class in pypomp.functional) PompTrainResult (class in pypomp.core.results) print_metadata() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) print_summary() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) probe() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) prune() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) pypomp.models.dacca module pypomp.models.linear_gaussian module pypomp.models.measles.measlesPomp module pypomp.models.spx module Q quadratic_coef (pypomp.mcap.MCAPResult attribute) quadratic_max (pypomp.mcap.MCAPResult attribute) R results() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) results_history (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) ResultsHistory (class in pypomp.core.results) rinit (pypomp.core.pomp.Pomp attribute) rmeas (pypomp.core.pomp.Pomp attribute) rproc (pypomp.core.pomp.Pomp attribute) RWSigma (class in pypomp.core.rw_sigma) S sample_params() (pypomp.core.pomp.Pomp static method) (pypomp.panel.panel.PanelPomp static method) se_mc (pypomp.mcap.MCAPResult attribute) se_stat (pypomp.mcap.MCAPResult attribute) se_total (pypomp.mcap.MCAPResult attribute) sigmas (pypomp.core.rw_sigma.RWSigma attribute) simulate() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) spx() (in module pypomp.models.spx) statenames (pypomp.core.pomp.Pomp attribute) subset() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) (pypomp.models.measles.measlesPomp.UKMeasles static method) T t0 (pypomp.core.pomp.Pomp attribute) theta (pypomp.core.parameters.PanelParameters property) (pypomp.core.pomp.Pomp property) (pypomp.panel.panel.PanelPomp attribute) time() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) to_est (pypomp.core.par_trans.ParTrans attribute) to_floats() (pypomp.core.par_trans.ParTrans method) to_jax_array() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) to_jax_array_canonical() (pypomp.core.parameters.PompParameters method) to_list() (pypomp.core.parameters.PompParameters method) traces() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) train() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) transform() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) transform_array() (pypomp.core.par_trans.ParTrans method) transform_panel_traces() (pypomp.core.par_trans.ParTrans method) U UKMeasles (class in pypomp.models.measles.measlesPomp) unit_objects (pypomp.panel.panel.PanelPomp attribute) V vcov (pypomp.mcap.MCAPResult attribute) Y ys (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp property)