Index A | B | C | D | E | F | G | I | L | M | N | P | Q | R | S | T | U | V | W | Y A accumvars (pypomp.core.pomp.Pomp attribute) Adam (class in pypomp.core.optimizer) all_names (pypomp.core.rw_sigma.RWSigma attribute) arma() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) B BFGS (class in pypomp.core.optimizer) C canonical_param_names (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) canonical_shared_param_names (pypomp.panel.panel.PanelPomp attribute) canonical_unit_param_names (pypomp.panel.panel.PanelPomp attribute) ci (pypomp.mcap.MCAPResult attribute) CLL() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) cool() (pypomp.core.rw_sigma.RWSigma method) cosine_decay() (pypomp.core.learning_rate.LearningRate method) covars (pypomp.core.pomp.Pomp attribute) D delta (pypomp.mcap.MCAPResult attribute) dhaka() (in module pypomp.models) dmeas (pypomp.core.pomp.Pomp attribute) dpop() (in module pypomp.functional) dpop_train() (pypomp.core.pomp.Pomp method) E ESS() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) expit() (in module pypomp.maths) F fast_binomial() (in module pypomp.random) fast_gamma() (in module pypomp.random) fast_multinomial() (in module pypomp.random) fast_nbinomial() (in module pypomp.random) fast_poisson() (in module pypomp.random) fit (pypomp.mcap.MCAPResult attribute) fresh_key (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) from_est (pypomp.core.par_trans.ParTrans attribute) FullMatrixAdam (class in pypomp.core.optimizer) G geometric_decay() (pypomp.core.learning_rate.LearningRate method) get_param_names() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) get_shared_param_names() (pypomp.core.parameters.PanelParameters method) get_unit_names() (pypomp.core.parameters.PanelParameters method) (pypomp.panel.panel.PanelPomp method) get_unit_param_names() (pypomp.core.parameters.PanelParameters method) get_unit_parameters() (pypomp.panel.panel.PanelPomp method) I init_names (pypomp.core.rw_sigma.RWSigma attribute) L LearningRate (class in pypomp.core.learning_rate) level (pypomp.mcap.MCAPResult attribute) LG() (in module pypomp.models) linear_decay() (pypomp.core.learning_rate.LearningRate method) logit (in module pypomp.maths) logLik (pypomp.core.parameters.PanelParameters property) (pypomp.core.parameters.PompParameters property) logLik_unit (pypomp.core.parameters.PanelParameters property) logmeanexp() (in module pypomp.maths) logmeanexp_se() (in module pypomp.maths) M mcap() (in module pypomp.mcap) MCAPResult (class in pypomp.mcap) merge() (pypomp.core.parameters.PompParameters static method) (pypomp.core.pomp.Pomp static method) (pypomp.panel.panel.PanelPomp static method) metadata (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) mif() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) mix_and_match() (pypomp.core.parameters.PanelParameters method) (pypomp.panel.panel.PanelPomp method) mle (pypomp.mcap.MCAPResult attribute) mop() (in module pypomp.functional) N negbin() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) Newton (class in pypomp.core.optimizer) not_init_names (pypomp.core.rw_sigma.RWSigma attribute) num_params() (pypomp.core.parameters.PompParameters method) num_replicates() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) P panel_transform() (pypomp.core.par_trans.ParTrans method) panel_transform_list() (pypomp.core.par_trans.ParTrans method) PanelParameters (class in pypomp.core.parameters) PanelPomp (class in pypomp.panel.panel) PanelPompMIFResult (class in pypomp.core.results) PanelPompPFilterResult (class in pypomp.core.results) PanelPompTrainResult (class in pypomp.core.results) par_trans (pypomp.core.pomp.Pomp attribute) ParTrans (class in pypomp.core.par_trans) pfilter() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) plot_simulations() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) plot_traces() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) Pomp (class in pypomp.core.pomp) Pomp() (pypomp.models.UKMeasles static method) PompMIFResult (class in pypomp.core.results) PompParameters (class in pypomp.core.parameters) PompPFilterResult (class in pypomp.core.results) PompStruct (class in pypomp.functional) PompTrainResult (class in pypomp.core.results) print_metadata() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) print_summary() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) probe() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) prune() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) Q quadratic_coef (pypomp.mcap.MCAPResult attribute) quadratic_max (pypomp.mcap.MCAPResult attribute) R rates (pypomp.core.learning_rate.LearningRate attribute) results() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) results_history (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp attribute) ResultsHistory (class in pypomp.core.results) rinit (pypomp.core.pomp.Pomp attribute) rmeas (pypomp.core.pomp.Pomp attribute) rproc (pypomp.core.pomp.Pomp attribute) RWSigma (class in pypomp.core.rw_sigma) S sample_params() (pypomp.core.pomp.Pomp static method) (pypomp.panel.panel.PanelPomp static method) se_mc (pypomp.mcap.MCAPResult attribute) se_stat (pypomp.mcap.MCAPResult attribute) se_total (pypomp.mcap.MCAPResult attribute) SGD (class in pypomp.core.optimizer) sigmas (pypomp.core.rw_sigma.RWSigma attribute) simulate() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) spx() (in module pypomp.models) statenames (pypomp.core.pomp.Pomp attribute) subset() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) T t0 (pypomp.core.pomp.Pomp attribute) theta (pypomp.core.parameters.PanelParameters property) (pypomp.core.pomp.Pomp property) (pypomp.panel.panel.PanelPomp attribute) time() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) to_array() (pypomp.core.learning_rate.LearningRate method) to_est (pypomp.core.par_trans.ParTrans attribute) to_floats() (pypomp.core.par_trans.ParTrans method) to_jax_array() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) to_jax_array_canonical() (pypomp.core.parameters.PompParameters method) to_list() (pypomp.core.parameters.PompParameters method) traces() (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) train() (in module pypomp.functional) (pypomp.core.pomp.Pomp method) (pypomp.panel.panel.PanelPomp method) transform() (pypomp.core.parameters.PanelParameters method) (pypomp.core.parameters.PompParameters method) transform_array() (pypomp.core.par_trans.ParTrans method) transform_panel_traces() (pypomp.core.par_trans.ParTrans method) U unit_objects (pypomp.panel.panel.PanelPomp attribute) V vcov (pypomp.mcap.MCAPResult attribute) W WeightedNewton (class in pypomp.core.optimizer) Y ys (pypomp.core.pomp.Pomp attribute) (pypomp.panel.panel.PanelPomp property)